Human Gene C6orf10 (uc021zqc.1) Description and Page Index
  Description: Homo sapiens chromosome 6 open reading frame 10 (C6orf10), mRNA.
Transcript (Including UTRs)
   Position: chr6_mann_hap4:3,603,328-3,682,495 Size: 79,168 Total Exon Count: 24 Strand: -
Coding Region
   Position: chr6_mann_hap4:3,603,594-3,682,322 Size: 78,729 Coding Exon Count: 24 

Page IndexSequence and LinksUniProtKB CommentsGenetic AssociationsCTDMicroarray
RNA StructureProtein StructureOther SpeciesmRNA DescriptionsOther NamesModel Information
Methods
Data last updated: 2013-06-14

+  Sequence and Links to Tools and Databases
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+  Comments and Description Text from UniProtKB
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-  Genetic Association Studies of Complex Diseases and Disorders
  Genetic Association Database: C6orf10
CDC HuGE Published Literature: C6orf10
Positive Disease Associations: Arthritis, Juvenile Rheumatoid , Arthritis, Rheumatoid , Asthma , Diabetes Mellitus, Type 1 , Diabetic Nephropathies , Drug-Induced Liver Injury , Graves Disease , Lupus Erythematosus, Systemic , Multiple Sclerosis , Psoriasis
Related Studies:
  1. Arthritis, Juvenile Rheumatoid
    Edward M Behrens et al. Arthritis and rheumatism 2008, Association of the TRAF1-C5 locus on chromosome 9 with juvenile idiopathic arthritis., Arthritis and rheumatism. [PubMed 18576341]
  2. Arthritis, Rheumatoid
    Eli A Stahl et al. Nature genetics 2010, Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk loci., Nature genetics. [PubMed 20453842]
  3. Asthma
    Tomomitsu Hirota et al. Nature genetics 2011, Genome-wide association study identifies three new susceptibility loci for adult asthma in the Japanese population., Nature genetics. [PubMed 21804548]
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-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  Microarray Expression Data
 
Expression ratio colors:

GNF Expression Atlas 2 Data from U133A and GNF1H Chips

      
      
      
     
    
     
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GNF Expression Atlas 1 Human Data on Affy U95 Chips

      
    
     
      
    
    
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-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -37.90173-0.219 Picture PostScript Text
3' UTR -32.06266-0.121 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

+  Protein Domain and Structure Information
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+  Orthologous Genes in Other Species
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-  Descriptions from all associated GenBank mRNAs
  AK310230 - Homo sapiens cDNA, FLJ17272.
U60665 - Human testis specific basic protein (TSBP), complete cds.
BC034774 - Homo sapiens chromosome 6 open reading frame 10, mRNA (cDNA clone MGC:34216 IMAGE:5169157), complete cds.
AK302176 - Homo sapiens cDNA FLJ57662 complete cds.
AK225742 - Homo sapiens mRNA for Splice isoform 2 of Q5SRN2 variant, clone: TST08922.

+  Other Names for This Gene
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+  Gene Model Information
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+  Methods, Credits, and Use Restrictions
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