Human Gene BTNL2 (uc011hei.3) Description and Page Index
  Description: Homo sapiens butyrophilin-like 2 (MHC class II associated) (BTNL2), mRNA.
Transcript (Including UTRs)
   Position: chr6_mann_hap4:3,705,349-3,717,760 Size: 12,412 Total Exon Count: 5 Strand: -


Page IndexSequence and LinksGenetic AssociationsCTDMicroarrayOther Species
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated: 2013-06-14

+  Sequence and Links to Tools and Databases
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-  Genetic Association Studies of Complex Diseases and Disorders
  Genetic Association Database: BTNL2
CDC HuGE Published Literature: BTNL2
Positive Disease Associations: Anti-cyclic Citrullianted Peptide Antibody , Arteries , Blood Pressure , Colitis, Ulcerative , Diabetes Mellitus, Type 1 , Diabetic Nephropathies , Graves' disease , Hepatitis B Vaccines , HIV-1 , HIV-1 control , knee osteoarthritis , Leprosy , Lupus Erythematosus, Systemic , multiple sclerosis , Osteoarthritis, Knee , Parkinson Disease , Peptides, Cyclic , primary biliary cirrhosis , Psoriasis , sarcoidosis , ulcerative colitis , Vitiligo , Waist-Hip Ratio
Related Studies:
  1. Anti-cyclic Citrullianted Peptide Antibody
    Cui ,et al. 2009, Genome Wide Association Study of Determinants of Anti-cyclic Citrullinated Peptide Antibody Titer in Adults with Rheumatoid Arthritis, Molecular medicine (Cambridge, Mass.) 2009 15- 40304 : 136-43. [PubMed 19287509]
  2. Arteries
    , , . [PubMed 0]
  3. Blood Pressure
    , , . [PubMed 0]
           more ... click here to view the complete list

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  Microarray Expression Data
 
Expression ratio colors:

GNF Expression Atlas 2 Data from U133A and GNF1H Chips

      
      
      
     
    
     
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC119668 - Homo sapiens butyrophilin-like 2 (MHC class II associated), mRNA (cDNA clone IMAGE:40116163), complete cds.
BC127641 - Homo sapiens butyrophilin-like 2 (MHC class II associated), mRNA (cDNA clone IMAGE:40116161), complete cds.
BC127642 - Homo sapiens butyrophilin-like 2 (MHC class II associated), mRNA (cDNA clone MGC:157676 IMAGE:40116164), complete cds.
AY684332 - Homo sapiens BTNL2_E mRNA, partial cds.
AY684333 - Homo sapiens BTNL2_I mRNA, partial cds.

-  Other Names for This Gene
  Alternate Gene Symbols: BC119668, uc011hei.2
UCSC ID: uc011hei.3
RefSeq Accession: NM_019602

-  Gene Model Information
 
category: nearCoding nonsense-mediated-decay: no RNA accession: BC119668.1
exon count: 5CDS single in 3' UTR: no RNA size: 845
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 464.50frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 8
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.