The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
AF085841 - Homo sapiens full length insert cDNA clone YI44H12. AK123424 - Homo sapiens cDNA FLJ41430 fis, clone BRHIP2005752, highly similar to Homo sapiens NG5. BC013201 - Homo sapiens proline-rich transmembrane protein 1, mRNA (cDNA clone MGC:18030 IMAGE:3924575), complete cds. BC063046 - Homo sapiens proline-rich transmembrane protein 1, mRNA (cDNA clone MGC:65172 IMAGE:5197474), complete cds. AK054885 - Homo sapiens cDNA FLJ30323 fis, clone BRACE2007109, highly similar to Extensin-like protein NG5. AL050203 - Homo sapiens mRNA; cDNA DKFZp586F1123 (from clone DKFZp586F1123).