Human Gene C6orf136 (uc011gts.2) Description and Page Index
  Description: Homo sapiens chromosome 6 open reading frame 136 (C6orf136), transcript variant 1, mRNA.
Transcript (Including UTRs)
   Position: chr6_mann_hap4:1,962,888-1,969,054 Size: 6,167 Total Exon Count: 6 Strand: +
Coding Region
   Position: chr6_mann_hap4:1,963,081-1,968,759 Size: 5,679 Coding Exon Count: 6 

Page IndexSequence and LinksUniProtKB CommentsCTDMicroarrayRNA Structure
Protein StructureOther SpeciesmRNA DescriptionsOther NamesModel InformationMethods
Data last updated: 2013-06-14

+  Sequence and Links to Tools and Databases
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+  Comments and Description Text from UniProtKB
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+  Comparative Toxicogenomics Database (CTD)
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-  Microarray Expression Data
 
Expression ratio colors:

GNF Expression Atlas 2 Data from U133A and GNF1H Chips

      
      
      
     
    
     
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+  mRNA Secondary Structure of 3' and 5' UTRs
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+  Protein Domain and Structure Information
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
Gene SorterGene Sorter    
Jackson LabRGD    
Protein Sequence     
Alignment     

-  Descriptions from all associated GenBank mRNAs
  BC073975 - Homo sapiens chromosome 6 open reading frame 136, mRNA (cDNA clone IMAGE:5764635), partial cds.
AK127564 - Homo sapiens cDNA FLJ45657 fis, clone CTONG2014959.
BC064397 - Homo sapiens chromosome 6 open reading frame 136, mRNA (cDNA clone IMAGE:5762716), partial cds.
BC016167 - Homo sapiens chromosome 6 open reading frame 136, mRNA (cDNA clone MGC:15854 IMAGE:3509511), complete cds.
CU677581 - Synthetic construct Homo sapiens gateway clone IMAGE:100021854 5' read C6orf136 mRNA.
HQ447672 - Synthetic construct Homo sapiens clone IMAGE:100071113; CCSB012468_01 chromosome 6 open reading frame 136 (C6orf136) gene, encodes complete protein.

+  Other Names for This Gene
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-  Gene Model Information
 
category: coding nonsense-mediated-decay: no RNA accession: NM_001109938.2
exon count: 6CDS single in 3' UTR: no RNA size: 1441
ORF size: 948CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 2039.00frame shift in genome: no % Coverage: 99.65
has start codon: yes stop codon in genome: no # of Alignments: 7
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
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