Human Gene HLA-L (uc011gsf.1) Description and Page Index
  Description: Homo sapiens major histocompatibility complex, class I, L (pseudogene) (HLA-L), non-coding RNA.
Transcript (Including UTRs)
   Position: chr6_mann_hap4:1,575,444-1,608,879 Size: 33,436 Total Exon Count: 6 Strand: +


Page IndexSequence and LinksGenetic AssociationsOther SpeciesmRNA DescriptionsOther Names
Model InformationMethods
Data last updated: 2013-06-14

+  Sequence and Links to Tools and Databases
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-  Genetic Association Studies of Complex Diseases and Disorders
  Genetic Association Database: HLA-L
CDC HuGE Published Literature: HLA-L

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC141846 - Homo sapiens FLJ45422 protein, mRNA (cDNA clone MGC:167006 IMAGE:8860339), complete cds.
AK127349 - Homo sapiens cDNA FLJ45422 fis, clone BRHIP3036715, moderately similar to HLA class I histocompatibility antigen, alpha chain H precursor.
BC139904 - Homo sapiens FLJ45422 protein, mRNA (cDNA clone MGC:164773 IMAGE:40147267), complete cds.

-  Other Names for This Gene
  Alternate Gene Symbols: BC141846
UCSC ID: uc011gsf.1
RefSeq Accession: NR_027822

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: yes RNA accession: BC141846.1
exon count: 6CDS single in 3' UTR: no RNA size: 1781
ORF size: 0CDS single in intron: no Alignment % ID: 99.49
txCdsPredict score: 799.00frame shift in genome: no % Coverage: 98.82
has start codon: yes stop codon in genome: no # of Alignments: 6
has end codon: yes retained intron: yes # AT/AC introns 0
selenocysteine: no end bleed into intron: 340# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.