Human Gene ZNRD1-AS1 (uc011gri.2) Description and Page Index
  Description: Homo sapiens ZNRD1 antisense RNA 1 (ZNRD1-AS1), non-coding RNA.
Transcript (Including UTRs)
   Position: chr6_mann_hap4:1,320,978-1,327,558 Size: 6,581 Total Exon Count: 3 Strand: -
Coding Region
   Position: chr6_mann_hap4:1,323,342-1,323,905 Size: 564 Coding Exon Count: 1 

Page IndexSequence and LinksUniProtKB CommentsCTDRNA StructureProtein Structure
Other SpeciesmRNA DescriptionsOther NamesModel InformationMethods
Data last updated: 2013-06-14

+  Sequence and Links to Tools and Databases
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-  Comments and Description Text from UniProtKB
DESCRIPTION: RecName: Full=Putative uncharacterized protein ZNRD1-AS1; AltName: Full=Protein HTEX4; AltName: Full=ZNRD1 antisense RNA 1; AltName: Full=ZNRD1 antisense gene protein 1;
TISSUE SPECIFICITY: Widely expressed at low levels, including testis.
CAUTION: Product of a dubious CDS prediction.

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  mRNA Secondary Structure of 3' and 5' UTRs
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -108.31371-0.292 Picture PostScript Text
3' UTR -626.562364-0.265 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  ModBase Predicted Comparative 3D Structure on Q2KJ03
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
Jackson Lab     
Protein Sequence     

-  Descriptions from all associated GenBank mRNAs
  BC067890 - Homo sapiens cDNA clone IMAGE:5271369.
AK126001 - Homo sapiens cDNA FLJ44013 fis, clone TESTI4024890.
AF238323 - Homo sapiens clone HTEX4.3, partial sequence.
AF032110 - Homo sapiens clone 5 HTEX4 mRNA, partial sequence.
AF032111 - Homo sapiens clone 1 HTEX4 mRNA, partial sequence.
BX648746 - Homo sapiens mRNA; cDNA DKFZp686I0445 (from clone DKFZp686I0445).
BC112395 - Homo sapiens chromosome 6 open reading frame 12, mRNA (cDNA clone IMAGE:40054092), with apparent retained intron.
AF032109 - Homo sapiens clone HTEX4 mRNA, complete sequence.
BC034573 - Homo sapiens non-protein coding RNA 171, mRNA (cDNA clone IMAGE:5167697), with apparent retained intron.

-  Other Names for This Gene
  Alternate Gene Symbols: BX648746, C6orf12, HTEX4, NCRNA00171, Q2KJ03, ZRAS1_HUMAN
UCSC ID: uc011gri.2
RefSeq Accession: NR_026751
Protein: Q2KJ03 (aka ZRAS1_HUMAN